SETTER - pairwise RNA alignment
MultiSETTER - multiple RNA alignment
  • 1st RNA molecule
  • PDB code , chain ID
    upload PDB file , chain ID
  • 2nd RNA molecule or batch of RNA molecules
  • PDB code , chain ID
    upload PDB file , chain ID
  • Parameters


  1. Hoksza D., Svozil D. Efficient RNA pairwise structure comparison by SETTER method. Bioinformatics, 2012, 28 (14), 1858-1864.
    DOI: 10.1093/bioinformatics/bts301

  2. Čech P., Svozil D., Hoksza D. SETTER: Web server for RNA structure comparison. Nucleic Acids Research, 2012, 40 (W1), W42-W48.
    DOI: 10.1093/nar/gks560

  3. Hoksza D., Svozil D. Multiple 3D RNA Structure Superposition Using Neighbor Joining, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2014, PP(99).
    DOI: 10.1109/TCBB.2014.2351810

  4. Čech P., Hoksza D., Svozil D. MultiSETTER: web server for multiple RNA structure comparison. BMC Bioinformatics, 2015, 16:253.
    DOI: 10.1186/s12859-015-0696-8